| 'Escaping massacre' : refugees in Scotland in the aftermath of the 1641 Ulster Rebellion | Young, John R., 1967- | Article in Book | Four Courts Press | 2007 |
| 'That much wasted country' : wartime Roscommon 1641-47 | Lenihan, Pádraig | Article in Book | | 2018 |
| 1690 : Battle of the Boyne | Lenihan, Pádraig, 1959- | Monograph or Collective Volume | Tempus | 2003 |
| A Swiss soldier in ireland, 1689-90 | Lenihan, PádraigSheridan, Geraldine | Article in Journal | | 2005 |
| A Swiss soldier In Ireland, 1689–90 | Lenihan, PádraigSheridan, Geraldine | Article in Journal | | 2005 |
| Aerial photography : a window on the past | Lenihan, Pádraig, 1959- | Article in Journal | | 1993 |
| Age of atrocity : violence and political conflict in early modern Ireland | Edwards, David, 1963-Lenihan, Pádraig, 1959-Tait, Clodagh | Monograph or Collective Volume | Four Courts | 2007 |
| Ballaí Luimnigh : the sieges of Limerick | Lenihan, Pádraig | Article in Book | | 2009 |
| Beseigers without guns : Athlone 1641-43 | Lenihan, Pádraig, 1959- | Article in Book | Geography Publications | 2022 |
| Catholicism and the Irish confederate armies : for God and king? | Lenihan, Pádraig | Article in Journal | | 1994 |
| Catholicism and the Irish confederate armies : for God or king? | Lenihan, Pádraig, 1959- | Article in Journal | | 1994 |
| Conclusion : Ireland's Military Revolution(s) | Lenihan, Pádraig, 1959- | Article in Book | | 2001 |
| Confederate Catholics and covenanters, 1644-6 | Lenihan, Pádraig, 1959- | Article in Book | | 2009 |
| Confederate Catholics at War, 1641-49 | Lenihan, Pádraig | Monograph or Collective Volume | Cork University Press | 2001 |
| Confederate military strategy, 1643-7 | Lenihan, Pádraig, 1959- | Article in Book | | 2001 |
| Conquest and Resistance : War in Seventeenth-Century Ireland | | Monograph or Collective Volume | Brill | 2001 |
| Consolidating conquest : Ireland 1603-1727 | Lenihan, Pádraig, 1959- | Monograph or Collective Volume | Longman | 2008 |
| Early modern Ireland : a history of violence | Edwards, David, 1963-Lenihan, Pádraig, 1959-Tait, Clodagh | Article in Book | | 2007 |
| Galway and the ‘new’ system of fortifications 1643-50 | Lenihan, Pádraig, 1959- | Article in Journal | | 1996 |
| Introduction | Lenihan, Pádraig, 1959- | Article in Book | | 2001 |
| King Billy - a military assessment | Lenihan, Pádraig, 1959- | Article in Journal | | 2004 |
| Poema de Hibernia, a Jacobite Latin epic on the Williamite wars | | Monograph or Collective Volume | Irish Manuscripts Commission | 2018 |
| Prophesies of the Saints in Irish Modern History | Lenihan, Pádraig, 1959- | Article in Book | | 2002 |
| Richard Talbot - the man who didn't kill Cromwell | Lenihan, Pádraig | Article in Journal | | 2015 |
| Scariffhollis in context : Irish battles of the mid-seventeenth century | Lenihan, Pádraig, 1959- | Article in Book | | 2001 |
| Schomberg at Dundalk, 1689 | Lenihan, Pádraig | Article in Journal | | 2009 |
| Siege Massacres in Ireland, Drogheda in context | Lenihan, Pádraig | Article in Book | | 2021 |
| Strategic Geography 1641-1691 | Lenihan, Pádraig, 1959- | Article in Book | | 2001 |
| The 'Irish Brigade' 1690-1715 | Lenihan, Pádraig | Article in Journal | | 2016 |
| The Boyne revisited | Lenihan, Pádraig | Article in Book | | 2015 |
| The Catholic Confederacy, 1642-9: an Irish state at war | Lenihan, Pádraig | Thesis | | 1995 |
| The impact of the battle of Aughrim (1691) on the Irish Catholic elite | Lenihan, Pádraig | Article in Book | | 2011 |
| The Leinster army and the Battle of Dungan's Hill, 1647 | Lenihan, Pádraig, 1959- | Article in Journal | | 1991 |
| The Strategic Involvement of Continental Powers in Ireland 1596-1691 | Ó hAnnracháin, Tadhg | Article in Book | Brill | 2001 |
| Unhappy Campers : Dundalk (1689) and After | Lenihan, Pádraig, 1959- | Article in Journal | | 2007 |
| War and population, 1649-52 | Lenihan, Pádraig, 1959- | Article in Journal | | 1997 |
| War in the Gap : Sligo 1641-91 | Lenihan, Pádraig, 1959- | Article in Book | | 2024 |
| Wars of religion, 1641– 1691 | Cronin, John JermiahLenihan, Pádraig | Article in Book | | 2018 |
| ‘My cabal of one’ [The marquis de Boisseleau and the ‘Battle of the Breach’ at the first siege of Limerick, 1690] | Lenihan, Pádraig | Article in Journal | | 2020 |